Lecture 10 Tests for Molecular Signatures of Selection
نویسنده
چکیده
There is a rich population genetics literature on tests for whether an observed pattern of polymorphism, or an observed between-species difference, or both, can be accounted for with a standard drift model. Rejection of this hypothesis offers the possibility that selection may play a role, but (as we will see) other forces (such as population history) can also cause strong deviations from the neutral model, especially when attempting to account for an observed pattern of polymorphism. While these tests have their roots in evolutionary biology, they have made their way into human genetics and animal/plant breeding.
منابع مشابه
Lecture 7
Finite population size results in random changes in allele frequencies. Lecture 3 briefly introduced genetic drift on a single locus. Here we greatly expand upon these results, building up a neutral theory for both single loci and also for neutral drift in phenotypes. These will serve as null models for tests of selection. Lecture 8 considers using molecular data to look for signatures of selec...
متن کاملLecture 7
Finite population size results in random changes in allele frequencies. Lecture 3 briefly introduced genetic drift on a single locus. Here we greatly expand upon these results, building up a neutral theory for both single loci and also for neutral drift in phenotypes. These will serve as null models for tests of selection. Lecture 8 considers using molecular data to look for signatures of selec...
متن کاملA genome-wide scan to detect signatures of recent selection in Australian Merino sheep
Domestication and selection are processes that conserve the pattern of genetic diversities between and within populations. Identification of genomic regions that are targets of selection for phenotypic traits is one of the main aims of research in animal genetics. An approach for identifying divergently selected regions of the genome is to compare FST values among loci to estimate the genetic v...
متن کاملExploring Gene Signatures in Different Molecular Subtypes of Gastric Cancer (MSS/ TP53+, MSS/TP53-): A Network-based and Machine Learning Approach
Gastric cancer (GC) is one of the leading causes of cancer mortality, worldwide. Molecular understanding of GC’s different subtypes is still dismal and it is necessary to develop new subtype-specific diagnostic and therapeutic approaches. Therefore developing comprehensive research in this area is demanding to have a deeper insight into molecular processes, underlying these subtypes. In this st...
متن کاملکاوش ژنومی نشانه های انتخاب در گاوهای بومی نژاد سرابی و تالشی ایران
The aim of this study was to find the footprint of selection in native Sarabi and Taleshi cattle breeds 296 cattle from two breeds were sampled and genotyped. by 40 k microarray of illumine company. 43 animals were removed because their ACR was below 0.09. Markers were filtered with minor allele frequency (MAF) equal 0.01 and Hardy-Weinberg equilibrium test (10-6). After filtering, 28782 marker...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2008